SHOGoiN Cell Transcriptome: GSM1269278

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269278


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T274Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 115.5328
2 ENSG00000115414 FN1 fibronectin 1 102.0543
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 72.7735
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 69.7724
5 ENSG00000167601 AXL AXL receptor tyrosine kinase 60.0519
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 31.5944
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 31.5147
8 ENSG00000075624 ACTB actin beta 29.1112
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 25.5257
10 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 24.8883

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277010 NA -0.1033
57170 ENSG00000277009 NA -0.1033
57169 ENSG00000277008 TEX28P2 testis expressed 28 pseudogene 2 -0.1033
57168 ENSG00000277007 NA -0.1033
57167 ENSG00000277004 RNA5SP412 RNA, 5S ribosomal pseudogene 412 -0.1033
57166 ENSG00000277003 NA -0.1033
57164 ENSG00000277001 NA -0.1033
57163 ENSG00000277000 DUSP12P1 dual specificity phosphatase 12 pseudogene 1 -0.1033
57162 ENSG00000276998 REXO1L2P REXO1 like 2, pseudogene -0.1033
10 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 24.8883

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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