SHOGoiN Cell Transcriptome: GSM1269281

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269281


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T276Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000103994 ZNF106 zinc finger protein 106 153.2346
2 ENSG00000064787 BCAS1 breast carcinoma amplified sequence 1 48.9959
3 ENSG00000155657 TTN titin 37.6528
4 ENSG00000118194 TNNT2 troponin T2, cardiac type 35.6191
5 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 35.1025
6 ENSG00000169554 ZEB2 zinc finger E-box binding homeobox 2 34.5625
7 ENSG00000106261 ZKSCAN1 zinc finger with KRAB and SCAN domains 1 32.5386
8 ENSG00000115306 SPTBN1 spectrin beta, non-erythrocytic 1 31.2295
9 ENSG00000081189 MEF2C myocyte enhancer factor 2C 30.8896
10 ENSG00000039560 RAI14 retinoic acid induced 14 30.0291

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277209 RPPH1 ribonuclease P RNA component H1 -0.0575
57170 ENSG00000277208 NA -0.0575
57168 ENSG00000277206 NA -0.0575
57166 ENSG00000277203 F8A1 coagulation factor VIII associated 1 -0.0575
57165 ENSG00000277202 MIR8063 microRNA 8063 -0.0575
57163 ENSG00000277200 NA -0.0575
57162 ENSG00000277199 LINC01632 long intergenic non-protein coding RNA 1632 -0.0575
10 ENSG00000039560 RAI14 retinoic acid induced 14 30.0291
9 ENSG00000081189 MEF2C myocyte enhancer factor 2C 30.8896
8 ENSG00000115306 SPTBN1 spectrin beta, non-erythrocytic 1 31.2295

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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