SHOGoiN Cell Transcriptome: GSM1269282

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269282


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T277Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 107.7736
2 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 96.8955
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 81.6888
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 69.4488
5 ENSG00000155657 TTN titin 49.8788
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 43.0345
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 35.1231
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 29.8056
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 29.1723
10 ENSG00000167601 AXL AXL receptor tyrosine kinase 28.4003

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277010 NA -0.1047
57170 ENSG00000277009 NA -0.1047
57169 ENSG00000277008 TEX28P2 testis expressed 28 pseudogene 2 -0.1047
57168 ENSG00000277004 RNA5SP412 RNA, 5S ribosomal pseudogene 412 -0.1047
57167 ENSG00000277003 NA -0.1047
57165 ENSG00000277001 NA -0.1047
57164 ENSG00000277000 DUSP12P1 dual specificity phosphatase 12 pseudogene 1 -0.1047
57163 ENSG00000276998 REXO1L2P REXO1 like 2, pseudogene -0.1047
10 ENSG00000167601 AXL AXL receptor tyrosine kinase 28.4003
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 29.1723

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...