SHOGoiN Cell Transcriptome: GSM1269282

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269282


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T277Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 107.7736
2 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 96.8955
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 81.6888
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 69.4488
5 ENSG00000155657 TTN titin 49.8788
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 43.0345
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 35.1231
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH dehydrogenase 4 29.8056
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 29.1723
10 ENSG00000167601 AXL AXL receptor tyrosine kinase 28.4003

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1047
60674 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1047
60673 ENSG00000283118 NA -0.1047
60672 ENSG00000283110 NA -0.1047
60671 ENSG00000283108 NA -0.1047
60670 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1047
60669 ENSG00000283098 NA -0.1047
60668 ENSG00000283097 NA -0.1047
60667 ENSG00000283096 NA -0.1047
60666 ENSG00000283093 NA -0.1047

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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