SHOGoiN Cell Transcriptome: GSM1269283

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269283


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T278Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 145.8730
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 80.1495
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 48.1889
4 ENSG00000115414 FN1 fibronectin 1 45.6079
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 44.1030
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 43.8755
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 38.8710
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 33.0004
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 28.5296
10 ENSG00000184009 ACTG1 actin gamma 1 26.8585

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.1064
57170 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.1064
57169 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.1064
57167 ENSG00000277024 NA -0.1064
57165 ENSG00000277022 NA -0.1064
57163 ENSG00000277020 NA -0.1064
57162 ENSG00000277017 NA -0.1064
10 ENSG00000184009 ACTG1 actin gamma 1 26.8585
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 28.5296
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 33.0004

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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