SHOGoiN Cell Transcriptome: GSM1269284

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269284


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T279Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 115.9013
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 104.4090
3 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 68.0002
4 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 63.7386
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 57.7225
6 ENSG00000108821 COL1A1 collagen, type I, alpha 1 53.3543
7 ENSG00000176887 SOX11 SRY (sex determining region Y)-box 11 30.6752
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.0359
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 29.4961
10 ENSG00000115414 FN1 fibronectin 1 28.8143

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0940
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0940
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0940
60672 ENSG00000283118 NA -0.0940
60671 ENSG00000283110 NA -0.0940
60670 ENSG00000283108 NA -0.0940
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0940
60668 ENSG00000283098 NA -0.0940
60667 ENSG00000283097 NA -0.0940
60666 ENSG00000283096 NA -0.0940

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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