SHOGoiN Cell Transcriptome: GSM1269284

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269284


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T279Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 115.9013
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 104.4090
3 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 68.0002
4 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 63.7386
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 57.7225
6 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 53.3543
7 ENSG00000176887 SOX11 SRY-box 11 30.6752
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.0359
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 29.4961
10 ENSG00000115414 FN1 fibronectin 1 28.8143

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277063 MIR8084 microRNA 8084 -0.0940
57169 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.0940
57167 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.0940
57166 ENSG00000277057 MIR6779 microRNA 6779 -0.0940
57165 ENSG00000277056 NA -0.0940
57163 ENSG00000277052 MIR6763 microRNA 6763 -0.0940
57162 ENSG00000277051 NA -0.0940
10 ENSG00000115414 FN1 fibronectin 1 28.8143
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 29.4961
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.0359

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...