SHOGoiN Cell Transcriptome: GSM1269289

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269289


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T282Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 143.4461
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 105.9123
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 52.2068
4 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 47.3584
5 ENSG00000115414 FN1 fibronectin 1 45.9287
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 39.4538
7 ENSG00000137801 THBS1 thrombospondin 1 37.3093
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 36.7603
9 ENSG00000091986 CCDC80 coiled-coil domain containing 80 29.5187
10 ENSG00000184009 ACTG1 actin gamma 1 27.1152

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277003 NA -0.1001
57169 ENSG00000277001 NA -0.1001
57168 ENSG00000277000 DUSP12P1 dual specificity phosphatase 12 pseudogene 1 -0.1001
57167 ENSG00000276998 REXO1L2P REXO1 like 2, pseudogene -0.1001
57166 ENSG00000276997 NA -0.1001
57164 ENSG00000276993 NA -0.1001
57163 ENSG00000276992 NA -0.1001
57162 ENSG00000276991 NA -0.1001
10 ENSG00000184009 ACTG1 actin gamma 1 27.1152
9 ENSG00000091986 CCDC80 coiled-coil domain containing 80 29.5187

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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