SHOGoiN Cell Transcriptome: GSM1269290

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269290


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T283Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 156.5929
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 89.6773
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 62.7190
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 60.2813
5 ENSG00000167552 TUBA1A tubulin alpha 1a 47.8682
6 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 40.8356
7 ENSG00000137801 THBS1 thrombospondin 1 28.8839
8 ENSG00000075624 ACTB actin beta 25.9475
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 25.5859
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 24.6694

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277052 MIR6763 microRNA 6763 -0.0819
57169 ENSG00000277051 NA -0.0819
57168 ENSG00000277050 NA -0.0819
57167 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.0819
57165 ENSG00000277047 NA -0.0819
57163 ENSG00000277043 EEF1A1P42 eukaryotic translation elongation factor 1 alpha 1 pseudogene 42 -0.0819
57162 ENSG00000277041 NA -0.0819
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 24.6694
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 25.5859
8 ENSG00000075624 ACTB actin beta 25.9475

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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