SHOGoiN Cell Transcriptome: GSM1269290

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269290


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T283Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 162.5140
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 81.7582
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 53.7421
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 49.6452
5 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 48.8840
6 ENSG00000167552 TUBA1A tubulin alpha 1a 44.7129
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 31.0359
8 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 30.4975
9 ENSG00000075624 ACTB actin beta 30.4171
10 ENSG00000137801 THBS1 thrombospondin 1 23.8323

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0744
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0744
58733 ENSG00000285992 novel transcript -0.0744
58732 ENSG00000285991 novel transcript -0.0744
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0744
58730 ENSG00000285989 TEC -0.0744
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0744
58728 ENSG00000285987 NA -0.0744
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0744
58726 ENSG00000285985 NA -0.0744

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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