SHOGoiN Cell Transcriptome: GSM1269291

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269291


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T284Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 125.5368
2 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 110.1848
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 90.8461
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 65.3045
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 35.3752
6 ENSG00000167552 TUBA1A tubulin alpha 1a 34.0013
7 ENSG00000137801 THBS1 thrombospondin 1 32.8706
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 29.3119
9 ENSG00000075624 ACTB actin beta 27.2082
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 26.0009

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277081 NA -0.0813
57170 ENSG00000277077 NA -0.0813
57169 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.0813
57167 ENSG00000277073 MIR6131 microRNA 6131 -0.0813
57166 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.0813
57165 ENSG00000277066 NA -0.0813
57163 ENSG00000277063 MIR8084 microRNA 8084 -0.0813
57162 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.0813
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 26.0009
9 ENSG00000075624 ACTB actin beta 27.2082

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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