SHOGoiN Cell Transcriptome: GSM1269292

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269292


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T285Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 126.2205
2 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 84.5276
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 77.5451
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 73.3415
5 ENSG00000167552 TUBA1A tubulin alpha 1a 59.2856
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 46.4927
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 39.4698
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 27.1418
9 ENSG00000075624 ACTB actin beta 26.9094
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 25.5958

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277020 NA -0.1010
57170 ENSG00000277017 NA -0.1010
57169 ENSG00000277014 MIR3179-4 microRNA 3179-4 -0.1010
57168 ENSG00000277013 NA -0.1010
57167 ENSG00000277011 NA -0.1010
57166 ENSG00000277010 NA -0.1010
57165 ENSG00000277009 NA -0.1010
57164 ENSG00000277008 TEX28P2 testis expressed 28 pseudogene 2 -0.1010
57163 ENSG00000277007 NA -0.1010
57162 ENSG00000277004 RNA5SP412 RNA, 5S ribosomal pseudogene 412 -0.1010

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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