SHOGoiN Cell Transcriptome: GSM1269293

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269293


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T286Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 125.7219
2 ENSG00000105640 RPL18A ribosomal protein L18a 113.1469
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 100.5719
4 ENSG00000115414 FN1 fibronectin 1 37.6971
5 ENSG00000196235 SUPT5H SPT5 homolog, DSIF elongation factor subunit 37.6971
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 37.6971
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 37.6971
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 25.1222
9 ENSG00000170606 HSPA4 heat shock protein family A (Hsp70) member 4 25.1222
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 25.1222

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277369 NA -0.0278
57170 ENSG00000277368 NA -0.0278
57169 ENSG00000277367 NA -0.0278
57168 ENSG00000277363 SRCIN1 SRC kinase signaling inhibitor 1 -0.0278
57166 ENSG00000277358 NA -0.0278
57165 ENSG00000277357 NPAP1P7 nuclear pore associated protein 1 pseudogene 7 -0.0278
57163 ENSG00000277352 NA -0.0278
57162 ENSG00000277351 NA -0.0278
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 25.1222
9 ENSG00000170606 HSPA4 heat shock protein family A (Hsp70) member 4 25.1222

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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