SHOGoiN Cell Transcriptome: GSM1269294

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269294


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T287Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 102.8659
2 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 102.8659
3 ENSG00000105640 RPL18A ribosomal protein L18a 56.0851
4 ENSG00000283041 NA 56.0851
5 ENSG00000115414 FN1 fibronectin 1 37.3727
6 ENSG00000139218 SCAF11 SR-related CTD associated factor 11 28.0165
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.0165
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.0165
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 28.0165
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 28.0165

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277367 NA -0.0520
57170 ENSG00000277363 SRCIN1 SRC kinase signaling inhibitor 1 -0.0520
57168 ENSG00000277358 NA -0.0520
57167 ENSG00000277357 NPAP1P7 nuclear pore associated protein 1 pseudogene 7 -0.0520
57165 ENSG00000277352 NA -0.0520
57164 ENSG00000277351 NA -0.0520
57163 ENSG00000277350 NA -0.0520
57162 ENSG00000277349 NA -0.0520
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 28.0165
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 28.0165

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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