SHOGoiN Cell Transcriptome: GSM1269294

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269294


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T287Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 102.8659
2 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 102.8659
3 ENSG00000105640 RPL18A ribosomal protein L18a 56.0851
4 ENSG00000283041 NA 56.0851
5 ENSG00000115414 FN1 fibronectin 1 37.3727
6 ENSG00000139218 SCAF11 SR-related CTD-associated factor 11 28.0165
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.0165
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.0165
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 28.0165
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 28.0165

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0520
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0520
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0520
60672 ENSG00000283118 NA -0.0520
60671 ENSG00000283117 NA -0.0520
60670 ENSG00000283110 NA -0.0520
60669 ENSG00000283108 NA -0.0520
60668 ENSG00000283103 NA -0.0520
60667 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0520
60666 ENSG00000283098 NA -0.0520

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...