SHOGoiN Cell Transcriptome: GSM1269295

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269295


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T288Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 104.6092
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 90.8755
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 90.8169
4 ENSG00000137801 THBS1 thrombospondin 1 66.4713
5 ENSG00000167601 AXL AXL receptor tyrosine kinase 58.3031
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 46.0675
7 ENSG00000115414 FN1 fibronectin 1 40.2844
8 ENSG00000075624 ACTB actin, beta 39.5312
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.2173
10 ENSG00000153904 DDAH1 dimethylarginine dimethylaminohydrolase 1 36.9786

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0880
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0880
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0880
60672 ENSG00000283118 NA -0.0880
60671 ENSG00000283110 NA -0.0880
60670 ENSG00000283108 NA -0.0880
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0880
60668 ENSG00000283098 NA -0.0880
60667 ENSG00000283097 NA -0.0880
60666 ENSG00000283096 NA -0.0880

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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