SHOGoiN Cell Transcriptome: GSM1269295

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269295


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T288Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 104.6092
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 90.8755
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 90.8169
4 ENSG00000137801 THBS1 thrombospondin 1 66.4713
5 ENSG00000167601 AXL AXL receptor tyrosine kinase 58.3031
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 46.0675
7 ENSG00000115414 FN1 fibronectin 1 40.2844
8 ENSG00000075624 ACTB actin beta 39.5312
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.2173
10 ENSG00000153904 DDAH1 dimethylarginine dimethylaminohydrolase 1 36.9786

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277103 NA -0.0880
57166 ENSG00000277099 NA -0.0880
57164 ENSG00000277096 NA -0.0880
57163 ENSG00000277095 NA -0.0880
10 ENSG00000153904 DDAH1 dimethylarginine dimethylaminohydrolase 1 36.9786
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.2173
8 ENSG00000075624 ACTB actin beta 39.5312
7 ENSG00000115414 FN1 fibronectin 1 40.2844
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 46.0675
5 ENSG00000167601 AXL AXL receptor tyrosine kinase 58.3031

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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