SHOGoiN Cell Transcriptome: GSM1269296

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269296


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T289Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 135.2868
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 89.1611
3 ENSG00000115414 FN1 fibronectin 1 86.9222
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 75.3526
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.4084
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 35.8808
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 33.0579
8 ENSG00000167601 AXL AXL receptor tyrosine kinase 27.2870
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 27.1409
10 ENSG00000091986 CCDC80 coiled-coil domain containing 80 25.5557

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277022 NA -0.0867
57168 ENSG00000277020 NA -0.0867
57167 ENSG00000277017 NA -0.0867
57166 ENSG00000277014 MIR3179-4 microRNA 3179-4 -0.0867
57165 ENSG00000277013 NA -0.0867
57164 ENSG00000277011 NA -0.0867
57163 ENSG00000277010 NA -0.0867
57162 ENSG00000277009 NA -0.0867
10 ENSG00000091986 CCDC80 coiled-coil domain containing 80 25.5557
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 27.1409

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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