SHOGoiN Cell Transcriptome: GSM1269297

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269297


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T290Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 172.3616
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 69.5876
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 54.7425
4 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 52.4587
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 42.1813
6 ENSG00000120708 TGFBI transforming growth factor beta induced 39.8974
7 ENSG00000102265 TIMP1 TIMP metallopeptidase inhibitor 1 33.0458
8 ENSG00000133110 POSTN periostin 31.9039
9 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 27.3362
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.1942

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277332 NA -0.0702
57165 ENSG00000277327 SPDYE20P speedy/RINGO cell cycle regulator family member E20, pseudogene -0.0702
57162 ENSG00000277324 NA -0.0702
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.1942
9 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 27.3362
8 ENSG00000133110 POSTN periostin 31.9039
7 ENSG00000102265 TIMP1 TIMP metallopeptidase inhibitor 1 33.0458
6 ENSG00000120708 TGFBI transforming growth factor beta induced 39.8974
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 42.1813
4 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 52.4587

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...