SHOGoiN Cell Transcriptome: GSM1269298

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269298


Profile download
8000301-738Sequence Read ArchiveSRP033135SRP033135_T291Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 106.4300
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 66.8815
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 63.7399
4 ENSG00000167601 AXL AXL receptor tyrosine kinase 57.9190
5 ENSG00000115414 FN1 fibronectin 1 44.1316
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.4642
7 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 37.1371
8 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 36.8644
9 ENSG00000167552 TUBA1A tubulin, alpha 1a 36.6154
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 34.5052

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1234
60674 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1234
60673 ENSG00000283118 NA -0.1234
60672 ENSG00000283110 NA -0.1234
60671 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1234
60670 ENSG00000283098 NA -0.1234
60669 ENSG00000283097 NA -0.1234
60668 ENSG00000283096 NA -0.1234
60667 ENSG00000283095 NA -0.1234
60666 ENSG00000283093 NA -0.1234

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...