SHOGoiN Cell Transcriptome: GSM1269298

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269298


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T291Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 106.4300
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 66.8815
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 63.7399
4 ENSG00000167601 AXL AXL receptor tyrosine kinase 57.9190
5 ENSG00000115414 FN1 fibronectin 1 44.1316
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.4642
7 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 37.1371
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 36.8644
9 ENSG00000167552 TUBA1A tubulin alpha 1a 36.6154
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 34.5052

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1234
57169 ENSG00000277109 NA -0.1234
57168 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1234
57166 ENSG00000277103 NA -0.1234
57163 ENSG00000277099 NA -0.1234
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 34.5052
9 ENSG00000167552 TUBA1A tubulin alpha 1a 36.6154
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 36.8644
7 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 37.1371
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.4642

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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