SHOGoiN Cell Transcriptome: GSM1269307

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269307


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T296Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 118.9607
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 84.5443
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 77.1665
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 67.7118
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 56.6550
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.8072
7 ENSG00000115414 FN1 fibronectin 1 36.1106
8 ENSG00000075624 ACTB actin beta 35.5239
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 27.3219
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 24.7901

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.1058
57170 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.1058
57168 ENSG00000277024 NA -0.1058
57166 ENSG00000277022 NA -0.1058
57164 ENSG00000277020 NA -0.1058
57163 ENSG00000277017 NA -0.1058
57162 ENSG00000277014 MIR3179-4 microRNA 3179-4 -0.1058
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 24.7901
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 27.3219
8 ENSG00000075624 ACTB actin beta 35.5239

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...