SHOGoiN Cell Transcriptome: GSM1269308

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269308


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T297Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 139.1585
2 ENSG00000115414 FN1 fibronectin 1 88.3426
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 79.2615
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 75.8491
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 37.7287
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.8551
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 31.0273
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 29.0742
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 26.8965
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 25.0780

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277103 NA -0.0886
57168 ENSG00000277099 NA -0.0886
57166 ENSG00000277096 NA -0.0886
57165 ENSG00000277095 NA -0.0886
57163 ENSG00000277089 NA -0.0886
57162 ENSG00000277087 NA -0.0886
10 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 25.0780
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 26.8965
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 29.0742
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 31.0273

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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