SHOGoiN Cell Transcriptome: GSM1269309

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269309


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T298Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 138.0266
2 ENSG00000115414 FN1 fibronectin 1 89.6983
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 79.8926
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 45.5297
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 39.9939
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 34.9928
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 31.8710
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 30.5578
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 29.4098
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 28.0966

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277051 NA -0.1015
57170 ENSG00000277050 NA -0.1015
57169 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.1015
57168 ENSG00000277047 NA -0.1015
57166 ENSG00000277043 EEF1A1P42 eukaryotic translation elongation factor 1 alpha 1 pseudogene 42 -0.1015
57165 ENSG00000277041 NA -0.1015
57164 ENSG00000277040 NA -0.1015
57163 ENSG00000277039 NA -0.1015
57162 ENSG00000277035 NA -0.1015
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 28.0966

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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