SHOGoiN Cell Transcriptome: GSM1269311

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269311


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T299Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 136.8686
2 ENSG00000155657 TTN titin 87.5285
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 75.6204
4 ENSG00000167552 TUBA1A tubulin, alpha 1a 71.5693
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 67.9835
6 ENSG00000168530 MYL1 myosin, light chain 1, alkali; skeletal, fast 46.9054
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 39.8711
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.8977
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.8299
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH dehydrogenase 4 28.2081

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0747
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0747
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0747
60672 ENSG00000283118 NA -0.0747
60671 ENSG00000283110 NA -0.0747
60670 ENSG00000283108 NA -0.0747
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0747
60668 ENSG00000283098 NA -0.0747
60667 ENSG00000283097 NA -0.0747
60666 ENSG00000283096 NA -0.0747

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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