SHOGoiN Cell Transcriptome: GSM1269312

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269312


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T300Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 103.6060
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 100.3344
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 76.4441
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 60.8061
5 ENSG00000167552 TUBA1A tubulin, alpha 1a 57.2171
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 37.1722
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 36.2933
8 ENSG00000075624 ACTB actin, beta 35.6341
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.7032
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 27.5404

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0976
60674 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0976
60673 ENSG00000283118 NA -0.0976
60672 ENSG00000283110 NA -0.0976
60671 ENSG00000283108 NA -0.0976
60670 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0976
60669 ENSG00000283098 NA -0.0976
60668 ENSG00000283097 NA -0.0976
60667 ENSG00000283096 NA -0.0976
60666 ENSG00000283095 NA -0.0976

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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