SHOGoiN Cell Transcriptome: GSM1269314

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269314


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T301Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 126.0945
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 78.5296
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 71.4965
4 ENSG00000115414 FN1 fibronectin 1 44.2181
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 37.8670
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 37.3779
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 35.6076
8 ENSG00000075624 ACTB actin beta 31.7569
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 29.2977
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 28.7398

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277118 NA -0.1092
57170 ENSG00000277117 ICOS ligand -0.1092
57167 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1092
57166 ENSG00000277109 NA -0.1092
57165 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1092
57162 ENSG00000277103 NA -0.1092
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 28.7398
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 29.2977
8 ENSG00000075624 ACTB actin beta 31.7569
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 35.6076

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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