SHOGoiN Cell Transcriptome: GSM1269315

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269315


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T302Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 154.3805
2 ENSG00000105640 RPL18A ribosomal protein L18a 107.5828
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 56.1053
4 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 42.0660
5 ENSG00000244313 NA 32.7064
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 28.0267
7 ENSG00000133110 POSTN periostin, osteoblast specific factor 23.3469
8 ENSG00000138758 SEPT11 septin 11 23.3469
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 23.3469
10 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 23.3469

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0520
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0520
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0520
60672 ENSG00000283118 NA -0.0520
60671 ENSG00000283117 NA -0.0520
60670 ENSG00000283110 NA -0.0520
60669 ENSG00000283108 NA -0.0520
60668 ENSG00000283103 NA -0.0520
60667 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0520
60666 ENSG00000283098 NA -0.0520

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...