SHOGoiN Cell Transcriptome: GSM1269315

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269315


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T302Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 154.3805
2 ENSG00000105640 RPL18A ribosomal protein L18a 107.5828
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 56.1053
4 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 42.0660
5 ENSG00000244313 NA 32.7064
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 28.0267
7 ENSG00000133110 POSTN periostin 23.3469
8 ENSG00000138758 SEPT11 septin 11 23.3469
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 23.3469
10 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 23.3469

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277357 NPAP1P7 nuclear pore associated protein 1 pseudogene 7 -0.0520
57169 ENSG00000277352 NA -0.0520
57168 ENSG00000277351 NA -0.0520
57167 ENSG00000277350 NA -0.0520
57166 ENSG00000277349 NA -0.0520
57162 ENSG00000277344 RNU1-6P RNA, U1 small nuclear 6, pseudogene -0.0520
10 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 23.3469
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 23.3469
8 ENSG00000138758 SEPT11 septin 11 23.3469
7 ENSG00000133110 POSTN periostin 23.3469

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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