SHOGoiN Cell Transcriptome: GSM1269318

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269318


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T304Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 114.5722
2 ENSG00000115414 FN1 fibronectin 1 107.3084
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 77.6812
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 61.4219
5 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 52.4186
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 38.8783
7 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 37.8048
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 35.9713
9 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 32.8134
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.8172

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0891
57169 ENSG00000277109 NA -0.0891
57168 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0891
57165 ENSG00000277103 NA -0.0891
57162 ENSG00000277099 NA -0.0891
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.8172
9 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 32.8134
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 35.9713
7 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 37.8048
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 38.8783

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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