SHOGoiN Cell Transcriptome: GSM1269319

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269319


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T305Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 128.6605
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 63.5428
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 60.6163
4 ENSG00000115414 FN1 fibronectin 1 52.3291
5 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 47.8920
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 45.2401
7 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 41.2765
8 ENSG00000184009 ACTG1 actin gamma 1 39.4770
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.8346
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 34.7794

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277119 NA -0.0975
57170 ENSG00000277118 NA -0.0975
57169 ENSG00000277117 ICOS ligand -0.0975
57166 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0975
57165 ENSG00000277109 NA -0.0975
57164 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0975
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 34.7794
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.8346
8 ENSG00000184009 ACTG1 actin gamma 1 39.4770
7 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 41.2765

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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