SHOGoiN Cell Transcriptome: GSM1269320

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269320


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T306Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 178.6594
2 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 79.1777
3 ENSG00000167552 TUBA1A tubulin, alpha 1a 73.4789
4 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 39.3145
5 ENSG00000075624 ACTB actin, beta 38.4388
6 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 24.0683
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 23.9023
8 ENSG00000155657 TTN titin 23.4645
9 ENSG00000159173 TNNI1 troponin I type 1 (skeletal, slow) 22.8113
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 22.5535

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0721
60674 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0721
60673 ENSG00000283118 NA -0.0721
60672 ENSG00000283110 NA -0.0721
60671 ENSG00000283108 NA -0.0721
60670 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0721
60669 ENSG00000283098 NA -0.0721
60668 ENSG00000283097 NA -0.0721
60667 ENSG00000283096 NA -0.0721
60666 ENSG00000283095 NA -0.0721

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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