SHOGoiN Cell Transcriptome: GSM1269320

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269320


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T306Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 178.6594
2 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 79.1777
3 ENSG00000167552 TUBA1A tubulin alpha 1a 73.4789
4 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 39.3145
5 ENSG00000075624 ACTB actin beta 38.4388
6 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 24.0683
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 23.9023
8 ENSG00000155657 TTN titin 23.4645
9 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 22.8113
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 22.5535

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277063 MIR8084 microRNA 8084 -0.0721
57170 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.0721
57168 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.0721
57167 ENSG00000277057 MIR6779 microRNA 6779 -0.0721
57166 ENSG00000277056 NA -0.0721
57164 ENSG00000277052 MIR6763 microRNA 6763 -0.0721
57163 ENSG00000277051 NA -0.0721
57162 ENSG00000277050 NA -0.0721
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 22.5535
9 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 22.8113

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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