SHOGoiN Cell Transcriptome: GSM1269321

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269321


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T307Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 144.8980
2 ENSG00000115414 FN1 fibronectin 1 82.6192
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 71.8760
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 44.7887
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 41.9117
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 37.8115
7 ENSG00000091986 CCDC80 coiled-coil domain containing 80 36.5486
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 35.4103
9 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 33.8303
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.4565

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277089 NA -0.0926
57170 ENSG00000277087 NA -0.0926
57169 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0926
57168 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0926
57166 ENSG00000277081 NA -0.0926
57165 ENSG00000277077 NA -0.0926
57164 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.0926
57162 ENSG00000277073 MIR6131 microRNA 6131 -0.0926
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.4565
9 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 33.8303

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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