SHOGoiN Cell Transcriptome: GSM1269327

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269327


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T312Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 123.1408
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 85.5294
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 79.1808
4 ENSG00000167601 AXL AXL receptor tyrosine kinase 51.0122
5 ENSG00000115414 FN1 fibronectin 1 50.1662
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.1343
7 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 32.6828
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 32.0616
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 31.3376
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 29.2684

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277050 NA -0.1043
57170 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.1043
57168 ENSG00000277047 NA -0.1043
57166 ENSG00000277043 EEF1A1P42 eukaryotic translation elongation factor 1 alpha 1 pseudogene 42 -0.1043
57165 ENSG00000277041 NA -0.1043
57164 ENSG00000277040 NA -0.1043
57163 ENSG00000277039 NA -0.1043
57162 ENSG00000277035 NA -0.1043
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 29.2684
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 31.3376

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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