SHOGoiN Cell Transcriptome: GSM1269328

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269328


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T313Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 109.1528
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 77.3381
3 ENSG00000167601 AXL AXL receptor tyrosine kinase 72.6384
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 58.5392
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 46.3076
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 39.1762
7 ENSG00000075624 ACTB actin beta 39.1141
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 36.3214
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 35.8362
10 ENSG00000167552 TUBA1A tubulin alpha 1a 35.5259

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276980 NA -0.1084
57169 ENSG00000276975 HYDIN2 HYDIN2, axonemal central pair apparatus protein (pseudogene) -0.1084
57168 ENSG00000276972 NA -0.1084
57167 ENSG00000276968 NA -0.1084
57166 ENSG00000276965 NA -0.1084
57165 ENSG00000276964 DUX4L23 double homeobox 4 like 23 -0.1084
57164 ENSG00000276963 NA -0.1084
57162 ENSG00000276961 MIR7848 microRNA 7848 -0.1084
10 ENSG00000167552 TUBA1A tubulin alpha 1a 35.5259
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 35.8362

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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