SHOGoiN Cell Transcriptome: GSM1269329

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269329


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T314Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 135.1773
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 108.9409
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 70.5240
4 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 46.4262
5 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 39.9563
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 37.1436
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 32.7424
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 32.7424
9 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 31.7196
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 28.3723

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277109 NA -0.0879
57170 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0879
57167 ENSG00000277103 NA -0.0879
57164 ENSG00000277099 NA -0.0879
57162 ENSG00000277096 NA -0.0879
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 28.3723
9 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 31.7196
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 32.7424
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 32.7424
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 37.1436

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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