SHOGoiN Cell Transcriptome: GSM1269331

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269331


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T316Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 122.6662
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 112.2591
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 95.4920
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 68.2919
5 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 45.5015
6 ENSG00000091986 CCDC80 coiled-coil domain containing 80 36.2938
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 31.4268
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.1735
9 ENSG00000120708 TGFBI transforming growth factor beta induced 27.1638
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 25.4207

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.0794
57170 ENSG00000277057 MIR6779 microRNA 6779 -0.0794
57169 ENSG00000277056 NA -0.0794
57167 ENSG00000277052 MIR6763 microRNA 6763 -0.0794
57166 ENSG00000277051 NA -0.0794
57165 ENSG00000277050 NA -0.0794
57164 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.0794
57163 ENSG00000277047 NA -0.0794
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 25.4207
9 ENSG00000120708 TGFBI transforming growth factor beta induced 27.1638

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...