SHOGoiN Cell Transcriptome: GSM1280066-1

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280066-1


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T7Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 149.6451
2 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 75.5197
3 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 67.7034
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 42.6321
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 27.9685
6 ENSMUSG00000097971 Gm26917 predicted gene, 26917 23.6916
7 ENSMUSG00000031762 Mt2 metallothionein 2 23.6425
8 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 23.0877
9 ENSMUSG00000101111 Gm28437 predicted gene 28437 19.9836
10 ENSMUSG00000031765 Mt1 metallothionein 1 19.3375

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.0875
46623 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.0875
46622 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.0875
46621 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.0875
46620 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.0875
46619 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.0875
46618 ENSMUSG00000108310 Gm44712 predicted gene 44712 -0.0875
46617 ENSMUSG00000108309 Gm44703 predicted gene 44703 -0.0875
46616 ENSMUSG00000108308 Gm45218 predicted gene 45218 -0.0875
46615 ENSMUSG00000108307 Ceacam-ps1 carcinoembryonic antigen-related cell adhesion molecule pseudogene 1 -0.0875

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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