SHOGoiN Cell Transcriptome: GSM1280073-2

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280073-2


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T22Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 125.1104
2 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 75.7575
3 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 61.8901
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 35.8730
5 ENSMUSG00000060143 Gm10076 predicted gene 10076 33.7303
6 ENSMUSG00000105879 Gm6204 predicted gene 6204 25.1896
7 ENSMUSG00000030744 Rps3 ribosomal protein S3 24.4954
8 ENSMUSG00000063696 Gm8730 predicted pseudogene 8730 22.3467
9 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 21.0958
10 ENSMUSG00000096942 Rps19-ps6 ribosomal protein S19, pseudogene 6 20.6649

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108329 Gm44725 predicted gene 44725 -0.0913
46623 ENSMUSG00000108328 Gm45196 predicted gene 45196 -0.0913
46622 ENSMUSG00000108327 Gm44939 predicted gene 44939 -0.0913
46621 ENSMUSG00000108326 Gm17838 predicted gene, 17838 -0.0913
46620 ENSMUSG00000108325 Gm44898 predicted gene 44898 -0.0913
46619 ENSMUSG00000108324 Gm44608 predicted gene 44608 -0.0913
46618 ENSMUSG00000108323 Gm44945 predicted gene 44945 -0.0913
46617 ENSMUSG00000108322 5430431A17Rik RIKEN cDNA 5430431A17 gene -0.0913
46616 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.0913
46615 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.0913

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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