SHOGoiN Cell Transcriptome: GSM1280087-2

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280087-2


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T50Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 169.1989
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 45.3743
3 ENSMUSG00000060143 Gm10076 predicted gene 10076 27.9720
4 ENSMUSG00000057113 Npm1 nucleophosmin 1 21.4414
5 ENSMUSG00000046721 Rpl14-ps1 ribosomal protein L14, pseudogene 1 20.9117
6 ENSMUSG00000028691 Prdx1 peroxiredoxin 1 20.3755
7 ENSMUSG00000023944 Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 19.2838
8 ENSMUSG00000037563 Rps16 ribosomal protein S16 19.1740
9 ENSMUSG00000106106 NA 18.3989
10 ENSMUSG00000030744 Rps3 ribosomal protein S3 18.2955

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108323 Gm44945 predicted gene 44945 -0.0950
46623 ENSMUSG00000108322 5430431A17Rik RIKEN cDNA 5430431A17 gene -0.0950
46622 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.0950
46621 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.0950
46620 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.0950
46619 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.0950
46618 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.0950
46617 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.0950
46616 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.0950
46615 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.0950

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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