SHOGoiN Cell Transcriptome: GSM1280101-1

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280101-1


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T77Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 122.0224
2 ENSMUSG00000098178 Gm42418 predicted gene, 42418 100.7108
3 ENSMUSG00000060461 Dppa5a developmental pluripotency associated 5A 59.6463
4 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 47.5924
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 36.0440
6 ENSMUSG00000097971 Gm26917 predicted gene, 26917 25.1697
7 ENSMUSG00000013150 Gfod2 glucose-fructose oxidoreductase domain containing 2 23.5056
8 ENSMUSG00000095288 Gm7618 predicted pseudogene 7618 22.8579
9 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 22.3365
10 ENSMUSG00000030744 Rps3 ribosomal protein S3 21.9574

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108327 Gm44939 predicted gene 44939 -0.0757
46623 ENSMUSG00000108326 Gm17838 predicted gene, 17838 -0.0757
46622 ENSMUSG00000108325 Gm44898 predicted gene 44898 -0.0757
46621 ENSMUSG00000108324 Gm44608 predicted gene 44608 -0.0757
46620 ENSMUSG00000108323 Gm44945 predicted gene 44945 -0.0757
46619 ENSMUSG00000108322 5430431A17Rik RIKEN cDNA 5430431A17 gene -0.0757
46618 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.0757
46617 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.0757
46616 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.0757
46615 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.0757

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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