SHOGoiN Cell Transcriptome: GSM1280101-2

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280101-2


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T78Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 118.9480
2 ENSMUSG00000098178 Gm42418 predicted gene, 42418 106.6665
3 ENSMUSG00000060461 Dppa5a developmental pluripotency associated 5A 58.0359
4 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 46.2903
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 36.0262
6 ENSMUSG00000097971 Gm26917 predicted gene, 26917 24.5537
7 ENSMUSG00000013150 Gfod2 glucose-fructose oxidoreductase domain containing 2 23.4565
8 ENSMUSG00000095288 Gm7618 predicted pseudogene 7618 22.7789
9 ENSMUSG00000030744 Rps3 ribosomal protein S3 22.0256
10 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 21.6666

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108335 Gm45215 predicted gene 45215 -0.0751
46623 ENSMUSG00000108334 Gm30771 predicted gene, 30771 -0.0751
46622 ENSMUSG00000108333 Gm45095 predicted gene 45095 -0.0751
46621 ENSMUSG00000108332 D530033B14Rik RIKEN cDNA D530033B14 gene -0.0751
46620 ENSMUSG00000108330 Gm44882 predicted gene 44882 -0.0751
46619 ENSMUSG00000108329 Gm44725 predicted gene 44725 -0.0751
46618 ENSMUSG00000108328 Gm45196 predicted gene 45196 -0.0751
46617 ENSMUSG00000108327 Gm44939 predicted gene 44939 -0.0751
46616 ENSMUSG00000108326 Gm17838 predicted gene, 17838 -0.0751
46615 ENSMUSG00000108325 Gm44898 predicted gene 44898 -0.0751

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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