SHOGoiN Cell Transcriptome: GSM1280105-1

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280105-1


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T85Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 133.3232
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 97.0772
3 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 60.3087
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 49.3538
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 36.0996
6 ENSMUSG00000101111 Gm28437 predicted gene 28437 28.9377
7 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 27.6959
8 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 26.6755
9 ENSMUSG00000031765 Mt1 metallothionein 1 25.6857
10 ENSMUSG00000097971 Gm26917 predicted gene, 26917 24.7082

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.0725
46623 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.0725
46622 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.0725
46621 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.0725
46620 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.0725
46619 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.0725
46618 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.0725
46617 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.0725
46616 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.0725
46615 ENSMUSG00000108312 Gm44521 predicted gene 44521 -0.0725

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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