SHOGoiN Cell Transcriptome: GSM1280111-2

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280111-2


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T98Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 134.9678
2 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 72.4866
3 ENSMUSG00000030744 Rps3 ribosomal protein S3 32.5486
4 ENSMUSG00000060143 Gm10076 predicted gene 10076 32.2312
5 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 27.6138
6 ENSMUSG00000060461 Dppa5a developmental pluripotency associated 5A 26.8302
7 ENSMUSG00000057113 Npm1 nucleophosmin 1 25.9948
8 ENSMUSG00000063696 Gm8730 predicted pseudogene 8730 24.7319
9 ENSMUSG00000028234 Rps20 ribosomal protein S20 24.4470
10 ENSMUSG00000074129 Rpl13a ribosomal protein L13A 23.6698

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108324 Gm44608 predicted gene 44608 -0.1039
46623 ENSMUSG00000108323 Gm44945 predicted gene 44945 -0.1039
46622 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.1039
46621 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.1039
46620 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.1039
46619 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.1039
46618 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.1039
46617 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.1039
46616 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.1039
46615 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.1039

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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