SHOGoiN Cell Transcriptome: GSM1280115-1

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280115-1


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T105Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 139.7630
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 56.3808
3 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 44.5898
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 34.2377
5 ENSMUSG00000060143 Gm10076 predicted gene 10076 33.4001
6 ENSMUSG00000030744 Rps3 ribosomal protein S3 29.1118
7 ENSMUSG00000063696 Gm8730 predicted pseudogene 8730 28.1883
8 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 26.5846
9 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 25.9331
10 ENSMUSG00000101111 Gm28437 predicted gene 28437 23.9715

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108333 Gm45095 predicted gene 45095 -0.0902
46623 ENSMUSG00000108332 D530033B14Rik RIKEN cDNA D530033B14 gene -0.0902
46622 ENSMUSG00000108331 Gm5322 predicted gene 5322 -0.0902
46621 ENSMUSG00000108330 Gm44882 predicted gene 44882 -0.0902
46620 ENSMUSG00000108329 Gm44725 predicted gene 44725 -0.0902
46619 ENSMUSG00000108328 Gm45196 predicted gene 45196 -0.0902
46618 ENSMUSG00000108327 Gm44939 predicted gene 44939 -0.0902
46617 ENSMUSG00000108326 Gm17838 predicted gene, 17838 -0.0902
46616 ENSMUSG00000108325 Gm44898 predicted gene 44898 -0.0902
46615 ENSMUSG00000108324 Gm44608 predicted gene 44608 -0.0902

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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