SHOGoiN Cell Transcriptome: GSM1280121-2

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280121-2


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T118Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 123.5508
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 44.2112
3 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 42.2405
4 ENSMUSG00000060143 Gm10076 predicted gene 10076 37.5803
5 ENSMUSG00000028234 Rps20 ribosomal protein S20 31.7531
6 ENSMUSG00000030744 Rps3 ribosomal protein S3 30.1765
7 ENSMUSG00000023944 Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 29.5196
8 ENSMUSG00000057113 Npm1 nucleophosmin 1 28.3990
9 ENSMUSG00000028691 Prdx1 peroxiredoxin 1 27.9353
10 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 26.6833

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108324 Gm44608 predicted gene 44608 -0.1033
46623 ENSMUSG00000108323 Gm44945 predicted gene 44945 -0.1033
46622 ENSMUSG00000108322 5430431A17Rik RIKEN cDNA 5430431A17 gene -0.1033
46621 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.1033
46620 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.1033
46619 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.1033
46618 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.1033
46617 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.1033
46616 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.1033
46615 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.1033

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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