SHOGoiN Cell Transcriptome: GSM1280128-2

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280128-2


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T132Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 135.5075
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 49.4834
3 ENSMUSG00000060143 Gm10076 predicted gene 10076 43.6891
4 ENSMUSG00000013150 Gfod2 glucose-fructose oxidoreductase domain containing 2 32.5954
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 30.1668
6 ENSMUSG00000063696 Gm8730 predicted pseudogene 8730 28.2859
7 ENSMUSG00000057113 Npm1 nucleophosmin 1 25.3161
8 ENSMUSG00000046721 Rpl14-ps1 ribosomal protein L14, pseudogene 1 25.1182
9 ENSMUSG00000028234 Rps20 ribosomal protein S20 23.2373
10 ENSMUSG00000028691 Prdx1 peroxiredoxin 1 23.1119

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.1050
46623 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.1050
46622 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.1050
46621 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.1050
46620 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.1050
46619 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.1050
46618 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.1050
46617 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.1050
46616 ENSMUSG00000108312 Gm44521 predicted gene 44521 -0.1050
46615 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.1050

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...