SHOGoiN Cell Transcriptome: GSM1280135-1

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280135-1


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T145Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 127.4526
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 63.6089
3 ENSMUSG00000060143 Gm10076 predicted gene 10076 37.5184
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 37.3421
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 31.3297
6 ENSMUSG00000057113 Npm1 nucleophosmin 1 31.2926
7 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 30.5875
8 ENSMUSG00000074800 Gm4149 predicted pseudogene 4149 25.5215
9 ENSMUSG00000097971 Gm26917 predicted gene, 26917 24.3803
10 ENSMUSG00000028234 Rps20 ribosomal protein S20 21.7638

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108325 Gm44898 predicted gene 44898 -0.1050
46623 ENSMUSG00000108324 Gm44608 predicted gene 44608 -0.1050
46622 ENSMUSG00000108323 Gm44945 predicted gene 44945 -0.1050
46621 ENSMUSG00000108322 5430431A17Rik RIKEN cDNA 5430431A17 gene -0.1050
46620 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.1050
46619 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.1050
46618 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.1050
46617 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.1050
46616 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.1050
46615 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.1050

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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