SHOGoiN Cell Transcriptome: GSM1280145-1

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280145-1


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T165Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 127.8770
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 65.7978
3 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 43.3189
4 ENSMUSG00000060461 Dppa5a developmental pluripotency associated 5A 42.1567
5 ENSMUSG00000060143 Gm10076 predicted gene 10076 28.8678
6 ENSMUSG00000097971 Gm26917 predicted gene, 26917 27.3767
7 ENSMUSG00000057113 Npm1 nucleophosmin 1 25.9084
8 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 25.5285
9 ENSMUSG00000023944 Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 23.9298
10 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 23.3118

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108331 Gm5322 predicted gene 5322 -0.0968
46623 ENSMUSG00000108330 Gm44882 predicted gene 44882 -0.0968
46622 ENSMUSG00000108329 Gm44725 predicted gene 44725 -0.0968
46621 ENSMUSG00000108328 Gm45196 predicted gene 45196 -0.0968
46620 ENSMUSG00000108327 Gm44939 predicted gene 44939 -0.0968
46619 ENSMUSG00000108326 Gm17838 predicted gene, 17838 -0.0968
46618 ENSMUSG00000108325 Gm44898 predicted gene 44898 -0.0968
46617 ENSMUSG00000108324 Gm44608 predicted gene 44608 -0.0968
46616 ENSMUSG00000108323 Gm44945 predicted gene 44945 -0.0968
46615 ENSMUSG00000108322 5430431A17Rik RIKEN cDNA 5430431A17 gene -0.0968

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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