SHOGoiN Cell Transcriptome: GSM1280151-2

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280151-2


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T178Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 144.6378
2 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 69.4292
3 ENSMUSG00000098178 Gm42418 predicted gene, 42418 59.3326
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 55.9566
5 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 52.3931
6 ENSMUSG00000097971 Gm26917 predicted gene, 26917 47.6731
7 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 42.2653
8 ENSMUSG00000064354 mt-Co2 mitochondrially encoded cytochrome c oxidase II 38.0454
9 ENSMUSG00000101111 Gm28437 predicted gene 28437 37.0138
10 ENSMUSG00000102070 Gm28661 predicted gene 28661 32.1062

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108344 Gm8952 predicted gene 8952 -0.0278
46623 ENSMUSG00000108343 Gm18307 predicted gene, 18307 -0.0278
46622 ENSMUSG00000108342 Gm29920 predicted gene, 29920 -0.0278
46621 ENSMUSG00000108341 Gm44746 predicted gene 44746 -0.0278
46620 ENSMUSG00000108340 Gm44520 predicted gene 44520 -0.0278
46619 ENSMUSG00000108339 Klk1b28-ps kallikrein 1-related peptidase b28, pseudogene -0.0278
46618 ENSMUSG00000108338 Gm44794 predicted gene 44794 -0.0278
46617 ENSMUSG00000108337 Gm4971 predicted gene 4971 -0.0278
46616 ENSMUSG00000108336 Olfr163-ps1 olfactory receptor 163, pseudogene 1 -0.0278
46615 ENSMUSG00000108335 Gm45215 predicted gene 45215 -0.0278

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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