SHOGoiN Cell Transcriptome: GSM1280155-2

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280155-2


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T186Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 134.9017
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 67.6911
3 ENSMUSG00000060461 Dppa5a developmental pluripotency associated 5A 59.6890
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 37.3585
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 35.6603
6 ENSMUSG00000060143 Gm10076 predicted gene 10076 30.6836
7 ENSMUSG00000097971 Gm26917 predicted gene, 26917 30.0875
8 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 27.9337
9 ENSMUSG00000064354 mt-Co2 mitochondrially encoded cytochrome c oxidase II 21.2082
10 ENSMUSG00000023944 Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 20.3590

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108337 Gm4971 predicted gene 4971 -0.0876
46623 ENSMUSG00000108336 Olfr163-ps1 olfactory receptor 163, pseudogene 1 -0.0876
46622 ENSMUSG00000108335 Gm45215 predicted gene 45215 -0.0876
46621 ENSMUSG00000108334 Gm30771 predicted gene, 30771 -0.0876
46620 ENSMUSG00000108333 Gm45095 predicted gene 45095 -0.0876
46619 ENSMUSG00000108332 D530033B14Rik RIKEN cDNA D530033B14 gene -0.0876
46618 ENSMUSG00000108331 Gm5322 predicted gene 5322 -0.0876
46617 ENSMUSG00000108330 Gm44882 predicted gene 44882 -0.0876
46616 ENSMUSG00000108329 Gm44725 predicted gene 44725 -0.0876
46615 ENSMUSG00000108328 Gm45196 predicted gene 45196 -0.0876

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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