SHOGoiN Cell Transcriptome: GSM1280157-2

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280157-2


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T190Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 159.2625
2 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 74.3827
3 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 47.7089
4 ENSMUSG00000029580 Actb actin, beta 28.4535
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 28.3227
6 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 26.5270
7 ENSMUSG00000021270 Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 24.0297
8 ENSMUSG00000060143 Gm10076 predicted gene 10076 22.1712
9 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 21.0980
10 ENSMUSG00000049775 Tmsb4x thymosin, beta 4, X chromosome 20.3912

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.0945
46623 ENSMUSG00000108312 Gm44521 predicted gene 44521 -0.0945
46622 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.0945
46621 ENSMUSG00000108310 Gm44712 predicted gene 44712 -0.0945
46620 ENSMUSG00000108309 Gm44703 predicted gene 44703 -0.0945
46619 ENSMUSG00000108308 Gm45218 predicted gene 45218 -0.0945
46618 ENSMUSG00000108307 Ceacam-ps1 carcinoembryonic antigen-related cell adhesion molecule pseudogene 1 -0.0945
46617 ENSMUSG00000108305 Gm19078 predicted gene, 19078 -0.0945
46616 ENSMUSG00000108304 Gm4607 predicted gene 4607 -0.0945
46615 ENSMUSG00000108303 Gm39075 predicted gene, 39075 -0.0945

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...