SHOGoiN Cell Transcriptome: GSM1280158-2

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280158-2


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T192Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 149.9215
2 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 68.5939
3 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 35.6111
4 ENSMUSG00000060461 Dppa5a developmental pluripotency associated 5A 34.2556
5 ENSMUSG00000063696 Gm8730 predicted pseudogene 8730 30.6411
6 ENSMUSG00000060143 Gm10076 predicted gene 10076 29.7374
7 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 26.5747
8 ENSMUSG00000030744 Rps3 ribosomal protein S3 22.5083
9 ENSMUSG00000046721 Rpl14-ps1 ribosomal protein L14, pseudogene 1 21.1529
10 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 20.7010

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108350 Gm44950 predicted gene 44950 -0.0827
46623 ENSMUSG00000108349 Gm18599 predicted gene, 18599 -0.0827
46622 ENSMUSG00000108348 Gm42372 predicted gene, 42372 -0.0827
46621 ENSMUSG00000108347 Gm19187 predicted gene, 19187 -0.0827
46620 ENSMUSG00000108346 Gm44980 predicted gene 44980 -0.0827
46619 ENSMUSG00000108345 4933435G04Rik RIKEN cDNA 4933435G04 gene -0.0827
46618 ENSMUSG00000108344 Gm8952 predicted gene 8952 -0.0827
46617 ENSMUSG00000108343 Gm18307 predicted gene, 18307 -0.0827
46616 ENSMUSG00000108342 Gm29920 predicted gene, 29920 -0.0827
46615 ENSMUSG00000108341 Gm44746 predicted gene 44746 -0.0827

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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