SHOGoiN Cell Transcriptome: GSM1280167

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280167


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T201Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 179.1245
2 ENSMUSG00000097971 Gm26917 predicted gene, 26917 57.5937
3 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 51.6997
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 42.7230
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 35.3493
6 ENSMUSG00000098178 Gm42418 predicted gene, 42418 33.2119
7 ENSMUSG00000101111 Gm28437 predicted gene 28437 26.4054
8 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 25.5587
9 ENSMUSG00000064358 mt-Co3 mitochondrially encoded cytochrome c oxidase III 19.3112
10 ENSMUSG00000064354 mt-Co2 mitochondrially encoded cytochrome c oxidase II 18.6042

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108338 Gm44794 predicted gene 44794 -0.0315
46623 ENSMUSG00000108337 Gm4971 predicted gene 4971 -0.0315
46622 ENSMUSG00000108336 Olfr163-ps1 olfactory receptor 163, pseudogene 1 -0.0315
46621 ENSMUSG00000108335 Gm45215 predicted gene 45215 -0.0315
46620 ENSMUSG00000108334 Gm30771 predicted gene, 30771 -0.0315
46619 ENSMUSG00000108333 Gm45095 predicted gene 45095 -0.0315
46618 ENSMUSG00000108332 D530033B14Rik RIKEN cDNA D530033B14 gene -0.0315
46617 ENSMUSG00000108331 Gm5322 predicted gene 5322 -0.0315
46616 ENSMUSG00000108330 Gm44882 predicted gene 44882 -0.0315
46615 ENSMUSG00000108329 Gm44725 predicted gene 44725 -0.0315

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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