SHOGoiN Cell Transcriptome: GSM1280172

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280172


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T206Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 154.9115
2 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 65.0877
3 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 55.8518
4 ENSMUSG00000101111 Gm28437 predicted gene 28437 45.0046
5 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 42.9920
6 ENSMUSG00000064354 mt-Co2 mitochondrially encoded cytochrome c oxidase II 37.0273
7 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 34.4249
8 ENSMUSG00000100862 Gm10925 predicted gene 10925 33.7318
9 ENSMUSG00000102070 Gm28661 predicted gene 28661 32.7407
10 ENSMUSG00000097971 Gm26917 predicted gene, 26917 31.6341

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108330 Gm44882 predicted gene 44882 -0.0320
46623 ENSMUSG00000108329 Gm44725 predicted gene 44725 -0.0320
46622 ENSMUSG00000108328 Gm45196 predicted gene 45196 -0.0320
46621 ENSMUSG00000108327 Gm44939 predicted gene 44939 -0.0320
46620 ENSMUSG00000108326 Gm17838 predicted gene, 17838 -0.0320
46619 ENSMUSG00000108325 Gm44898 predicted gene 44898 -0.0320
46618 ENSMUSG00000108324 Gm44608 predicted gene 44608 -0.0320
46617 ENSMUSG00000108323 Gm44945 predicted gene 44945 -0.0320
46616 ENSMUSG00000108322 5430431A17Rik RIKEN cDNA 5430431A17 gene -0.0320
46615 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.0320

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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