SHOGoiN Cell Transcriptome: GSM1280174

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280174


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T208Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 144.2563
2 ENSMUSG00000097971 Gm26917 predicted gene, 26917 60.2754
3 ENSMUSG00000101111 Gm28437 predicted gene 28437 51.0862
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 50.5371
5 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 49.1475
6 ENSMUSG00000100862 Gm10925 predicted gene 10925 45.4718
7 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 41.0676
8 ENSMUSG00000064357 mt-Atp6 mitochondrially encoded ATP synthase 6 40.6978
9 ENSMUSG00000098178 Gm42418 predicted gene, 42418 36.3834
10 ENSMUSG00000064354 mt-Co2 mitochondrially encoded cytochrome c oxidase II 35.7782

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108343 Gm18307 predicted gene, 18307 -0.0263
46623 ENSMUSG00000108342 Gm29920 predicted gene, 29920 -0.0263
46622 ENSMUSG00000108341 Gm44746 predicted gene 44746 -0.0263
46621 ENSMUSG00000108340 Gm44520 predicted gene 44520 -0.0263
46620 ENSMUSG00000108339 Klk1b28-ps kallikrein 1-related peptidase b28, pseudogene -0.0263
46619 ENSMUSG00000108338 Gm44794 predicted gene 44794 -0.0263
46618 ENSMUSG00000108337 Gm4971 predicted gene 4971 -0.0263
46617 ENSMUSG00000108336 Olfr163-ps1 olfactory receptor 163, pseudogene 1 -0.0263
46616 ENSMUSG00000108335 Gm45215 predicted gene 45215 -0.0263
46615 ENSMUSG00000108334 Gm30771 predicted gene, 30771 -0.0263

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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