SHOGoiN Cell Transcriptome: GSM1280177

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280177


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T211Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 134.4088
2 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 56.8626
3 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 56.1883
4 ENSMUSG00000098178 Gm42418 predicted gene, 42418 53.7740
5 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 41.9192
6 ENSMUSG00000101111 Gm28437 predicted gene 28437 41.0395
7 ENSMUSG00000064354 mt-Co2 mitochondrially encoded cytochrome c oxidase II 39.2723
8 ENSMUSG00000102070 Gm28661 predicted gene 28661 36.2728
9 ENSMUSG00000097971 Gm26917 predicted gene, 26917 35.3039
10 ENSMUSG00000100862 Gm10925 predicted gene 10925 34.9164

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108275 Gm7880 predicted gene 7880 -0.0666
46623 ENSMUSG00000108274 Gm44169 predicted gene, 44169 -0.0666
46621 ENSMUSG00000108272 Gm44161 predicted gene, 44161 -0.0666
46620 ENSMUSG00000108271 Gm44236 predicted gene, 44236 -0.0666
46619 ENSMUSG00000108269 Gm18422 predicted gene, 18422 -0.0666
46618 ENSMUSG00000108265 Olfr318 olfactory receptor 318 -0.0666
46617 ENSMUSG00000108264 Gm20371 predicted gene, 20371 -0.0666
46616 ENSMUSG00000108263 1700051K13Rik RIKEN cDNA 1700051K13 gene -0.0666
46615 ENSMUSG00000108262 Gm43867 predicted gene, 43867 -0.0666
10 ENSMUSG00000100862 Gm10925 predicted gene 10925 34.9164

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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